J3_7UCK_006

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|G|1969
7UCK|1|5|A|1970
7UCK|1|5|U|1971
7UCK|1|5|G|1972
*
7UCK|1|5|C|1994
7UCK|1|5|G|1995
7UCK|1|5|C|1996
7UCK|1|5|U|1997
7UCK|1|5|A|1998
7UCK|1|5|A|1999
7UCK|1|5|G|2000
7UCK|1|5|G|2001
*
7UCK|1|5|C|2016
7UCK|1|5|A|2017
7UCK|1|5|C|2018

Current chains

Chain 5

28s rRNA

Nearby chains