J3_7UCK_014
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GUC*GCCU(5MC)ACGAUCCU*A(OMG)(MHG)UGUC
- Length
- 23 nucleotides
- Bulged bases
- 7UCK|1|5|U|4374
- QA status
- Modified nucleotides: 5MC, OMG, MHG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCK|1|5|G|4228
7UCK|1|5|U|4229
7UCK|1|5|C|4230
*
7UCK|1|5|G|4331
7UCK|1|5|C|4332
7UCK|1|5|C|4333
7UCK|1|5|U|4334
7UCK|1|5|5MC|4335
7UCK|1|5|A|4336
7UCK|1|5|C|4337
7UCK|1|5|G|4338
7UCK|1|5|A|4339
7UCK|1|5|U|4340
7UCK|1|5|C|4341
7UCK|1|5|C|4342
7UCK|1|5|U|4343
*
7UCK|1|5|A|4369
7UCK|1|5|OMG|4370
7UCK|1|5|MHG|4371
7UCK|1|5|U|4372
7UCK|1|5|G|4373
7UCK|1|5|U|4374
7UCK|1|5|C|4375
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain Q
- 60S ribosomal protein L18
- Chain T
- 60S ribosomal protein L21
- Chain a
- 60S ribosomal protein L27a
- Chain o
- 60S ribosomal protein L36a
Coloring options: