J3_7UCK_035

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

7UCK|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|C|451
7UCK|1|5|A|452
7UCK|1|5|G|453
7UCK|1|5|U|454
7UCK|1|5|C|455
*
7UCK|1|5|G|701
7UCK|1|5|U|702
7UCK|1|5|G|703
7UCK|1|5|C|704
7UCK|1|5|G|705
*
7UCK|1|5|C|1292
7UCK|1|5|G|1293
7UCK|1|5|A|1294
7UCK|1|5|U|1295
7UCK|1|5|G|1296

Current chains

Chain 5

28s rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L35a