J3_7UCK_038
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGA(PSU)
- Length
- 26 nucleotides
- Bulged bases
- 7UCK|1|5|C|2470, 7UCK|1|5|A|2472, 7UCK|1|5|G|2475
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCK|1|5|A|2451
7UCK|1|5|G|2452
7UCK|1|5|A|2453
7UCK|1|5|U|2454
7UCK|1|5|G|2455
7UCK|1|5|G|2456
*
7UCK|1|5|C|2465
7UCK|1|5|G|2466
7UCK|1|5|U|2467
7UCK|1|5|U|2468
7UCK|1|5|C|2469
7UCK|1|5|C|2470
7UCK|1|5|G|2471
7UCK|1|5|A|2472
7UCK|1|5|A|2473
7UCK|1|5|G|2474
7UCK|1|5|G|2475
7UCK|1|5|G|2476
*
7UCK|1|5|C|2501
7UCK|1|5|A|2502
7UCK|1|5|G|2503
7UCK|1|5|C|2504
7UCK|1|5|C|2505
7UCK|1|5|G|2506
7UCK|1|5|A|2507
7UCK|1|5|PSU|2508
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- 60S ribosomal protein L8
- Chain G
- 60S ribosomal protein L7a
- Chain N
- 60S ribosomal protein L15
- Chain X
- 60S ribosomal protein L23a
- Chain j
- 60S ribosomal protein L37
Coloring options: