J3_7UCK_042
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGGUUG*CCUUC*GCACCGCACGUUCGUG
- Length
- 27 nucleotides
- Bulged bases
- 7UCK|1|5|U|4882, 7UCK|1|5|A|4938, 7UCK|1|5|C|4940, 7UCK|1|5|A|4943, 7UCK|1|5|C|4944, 7UCK|1|5|U|4950
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UCK|1|5|C|4749
7UCK|1|5|G|4750
7UCK|1|5|G|4751
7UCK|1|5|U|4752
7UCK|1|5|U|4753
7UCK|1|5|G|4754
*
7UCK|1|5|C|4879
7UCK|1|5|C|4880
7UCK|1|5|U|4881
7UCK|1|5|U|4882
7UCK|1|5|C|4883
*
7UCK|1|5|G|4936
7UCK|1|5|C|4937
7UCK|1|5|A|4938
7UCK|1|5|C|4939
7UCK|1|5|C|4940
7UCK|1|5|G|4941
7UCK|1|5|C|4942
7UCK|1|5|A|4943
7UCK|1|5|C|4944
7UCK|1|5|G|4945
7UCK|1|5|U|4946
7UCK|1|5|U|4947
7UCK|1|5|C|4948
7UCK|1|5|G|4949
7UCK|1|5|U|4950
7UCK|1|5|G|4951
Current chains
- Chain 5
- 28s rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain M
- 60S ribosomal protein L14
- Chain O
- 60S ribosomal protein L13a
- Chain f
- 60S ribosomal protein L35a
Coloring options: