3D structure

PDB id
7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CUCAU*AGUAGAAC*GGUAAAAG
Length
21 nucleotides
Bulged bases
7UG6|1|1|U|2688, 7UG6|1|1|A|2703
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7UG6|1|1|C|2664
7UG6|1|1|U|2665
7UG6|1|1|C|2666
7UG6|1|1|A|2667
7UG6|1|1|U|2668
*
7UG6|1|1|A|2686
7UG6|1|1|G|2687
7UG6|1|1|U|2688
7UG6|1|1|A|2689
7UG6|1|1|G|2690
7UG6|1|1|A|2691
7UG6|1|1|A|2692
7UG6|1|1|C|2693
*
7UG6|1|1|G|2699
7UG6|1|1|G|2700
7UG6|1|1|U|2701
7UG6|1|1|A|2702
7UG6|1|1|A|2703
7UG6|1|1|A|2704
7UG6|1|1|A|2705
7UG6|1|1|G|2706

Current chains

Chain 1
25S rRNA

Nearby chains

Chain 3
5S ribosomal RNA; 5S rRNA
Chain D
60S ribosomal protein L5
Chain J
60S ribosomal protein L11-A
Chain v
Ribosome biogenesis protein RPF2

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2471 s