J3_7UG6_024
3D structure
- PDB id
- 7UG6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUAUAGAUG*CAUAGCAGG*CGAAUUGCAAUGUCAUUU
- Length
- 36 nucleotides
- Bulged bases
- 7UG6|1|1|A|3172, 7UG6|1|1|G|3173, 7UG6|1|1|A|3215, 7UG6|1|1|G|3216, 7UG6|1|1|G|3219, 7UG6|1|1|A|3268, 7UG6|1|1|U|3270, 7UG6|1|1|C|3272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UG6|1|1|A|3168
7UG6|1|1|U|3169
7UG6|1|1|A|3170
7UG6|1|1|U|3171
7UG6|1|1|A|3172
7UG6|1|1|G|3173
7UG6|1|1|A|3174
7UG6|1|1|U|3175
7UG6|1|1|G|3176
*
7UG6|1|1|C|3212
7UG6|1|1|A|3213
7UG6|1|1|U|3214
7UG6|1|1|A|3215
7UG6|1|1|G|3216
7UG6|1|1|C|3217
7UG6|1|1|A|3218
7UG6|1|1|G|3219
7UG6|1|1|G|3220
*
7UG6|1|1|C|3265
7UG6|1|1|G|3266
7UG6|1|1|A|3267
7UG6|1|1|A|3268
7UG6|1|1|U|3269
7UG6|1|1|U|3270
7UG6|1|1|G|3271
7UG6|1|1|C|3272
7UG6|1|1|A|3273
7UG6|1|1|A|3274
7UG6|1|1|U|3275
7UG6|1|1|G|3276
7UG6|1|1|U|3277
7UG6|1|1|C|3278
7UG6|1|1|A|3279
7UG6|1|1|U|3280
7UG6|1|1|U|3281
7UG6|1|1|U|3282
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6-A
- Chain M
- 60S ribosomal protein L14-A
- Chain O
- 60S ribosomal protein L16-A
- Chain P
- 60S ribosomal protein L17-A
- Chain c
- Ribosome biogenesis protein ALB1
- Chain f
- 60S ribosomal protein L33-A
- Chain z
- UPF0642 protein YBL028C
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