J3_7UG7_008

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_008 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.2314

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

7UG7|1|16|C|990
7UG7|1|16|U|991
7UG7|1|16|U|992
7UG7|1|16|G|993
*
7UG7|1|16|C|1045
7UG7|1|16|A|1046
7UG7|1|16|G|1047
*
7UG7|1|16|C|1210
7UG7|1|16|U|1211
7UG7|1|16|U|1212
7UG7|1|16|A|1213
7UG7|1|16|C|1214
7UG7|1|16|G|1215

Current chains

Chain 16

16S rRNA

Nearby chains

Chain EF

Elongation factor G

Chain SN

30S ribosomal protein S14