J3_7UG7_019

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_019 not in the Motif Atlas

Homologous match to J3_8VTW_004

Geometric discrepancy: 0.1997

The information below is about J3_8VTW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.5

Basepair signature

cWW-cWW-cWW-cWW-tSH-F-F-F

Number of instances in this motif group

5

Unit IDs

7UG7|1|23|C|1298
7UG7|1|23|G|1299
7UG7|1|23|G|1300
7UG7|1|23|A|1301
7UG7|1|23|A|1302
7UG7|1|23|G|1303
*
7UG7|1|23|C|1625
7UG7|1|23|A|1626
7UG7|1|23|G|1627
*
7UG7|1|23|C|1639
7UG7|1|23|A|1640
7UG7|1|23|A|1641
7UG7|1|23|G|1642

Current chains

Chain 23

23S rRNA

Nearby chains