J3_7UNW_019
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7UNW|1|a|A|969, 7UNW|1|a|G|970
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNW_019 not in the Motif Atlas
- Homologous match to J3_4LFB_004
- Geometric discrepancy: 0.1098
- The information below is about J3_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UNW|1|a|U|949
7UNW|1|a|U|950
7UNW|1|a|U|951
7UNW|1|a|A|952
7UNW|1|a|A|953
7UNW|1|a|U|954
7UNW|1|a|U|955
7UNW|1|a|C|956
*
7UNW|1|a|G|967
7UNW|1|a|A|968
7UNW|1|a|A|969
7UNW|1|a|G|970
7UNW|1|a|A|971
7UNW|1|a|A|972
7UNW|1|a|C|973
7UNW|1|a|C|974
7UNW|1|a|U|975
7UNW|1|a|U|976
7UNW|1|a|A|977
7UNW|1|a|C|978
*
7UNW|1|a|G|1215
7UNW|1|a|G|1216
7UNW|1|a|C|1217
7UNW|1|a|U|1218
7UNW|1|a|A|1219
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
Coloring options: