J3_7UVV_004

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CAAG*CCGAAAC*GUG

Length

14 nucleotides

Bulged bases

7UVV|1|A|G|1605, 7UVV|1|A|A|1607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVV_004 not in the Motif Atlas

Homologous match to J3_7RQB_008

Geometric discrepancy: 0.351

The information below is about J3_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_16623.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

7UVV|1|A|C|1301
7UVV|1|A|A|1302
7UVV|1|A|A|1303
7UVV|1|A|G|1304
*
7UVV|1|A|C|1603
7UVV|1|A|C|1604
7UVV|1|A|G|1605
7UVV|1|A|A|1606
7UVV|1|A|A|1607
7UVV|1|A|A|1608
7UVV|1|A|C|1609
*
7UVV|1|A|G|1618
7UVV|1|A|U|1619
7UVV|1|A|G|1620

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34