J3_7UVW_001

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CGAUCUA*UAG*CAAG

Length

14 nucleotides

Bulged bases

7UVW|1|A|U|684, 7UVW|1|A|A|790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVW_001 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0769

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7UVW|1|A|C|681
7UVW|1|A|G|682
7UVW|1|A|A|683
7UVW|1|A|U|684
7UVW|1|A|C|685
7UVW|1|A|U|686
7UVW|1|A|A|687
*
7UVW|1|A|U|771
7UVW|1|A|A|772
7UVW|1|A|G|773
*
7UVW|1|A|C|789
7UVW|1|A|A|790
7UVW|1|A|A|791
7UVW|1|A|G|792

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain C

50S ribosomal protein L2