J3_7UVW_007

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

7UVW|1|A|A|2514, 7UVW|1|A|U|2515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVW_007 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.0974

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7UVW|1|A|C|2513
7UVW|1|A|A|2514
7UVW|1|A|U|2515
7UVW|1|A|C|2516
*
7UVW|1|A|G|2541
7UVW|1|A|U|2542
7UVW|1|A|A|2543
*
7UVW|1|A|U|2557
7UVW|1|A|U|2558
7UVW|1|A|U|2559
7UVW|1|A|A|2560
7UVW|1|A|A|2561
7UVW|1|A|A|2562
7UVW|1|A|G|2563

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L14