J3_7UVW_020

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GGAAC*GAACGUAGAG*CGUAC

Length

20 nucleotides

Bulged bases

7UVW|1|A|U|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVW_020 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0931

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7UVW|1|A|G|299
7UVW|1|A|G|300
7UVW|1|A|A|301
7UVW|1|A|A|302
7UVW|1|A|C|303
*
7UVW|1|A|G|318
7UVW|1|A|A|319
7UVW|1|A|A|320
7UVW|1|A|C|321
7UVW|1|A|G|322
7UVW|1|A|U|323
7UVW|1|A|A|324
7UVW|1|A|G|325
7UVW|1|A|A|326
7UVW|1|A|G|327
*
7UVW|1|A|C|339
7UVW|1|A|G|340
7UVW|1|A|U|341
7UVW|1|A|A|342
7UVW|1|A|C|343

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain T

50S ribosomal protein L24