J3_7UVY_021

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

GGAAC*GAACGUAGAG*CGUAC

Length

20 nucleotides

Bulged bases

7UVY|1|A|U|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVY_021 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0657

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7UVY|1|A|G|299
7UVY|1|A|G|300
7UVY|1|A|A|301
7UVY|1|A|A|302
7UVY|1|A|C|303
*
7UVY|1|A|G|318
7UVY|1|A|A|319
7UVY|1|A|A|320
7UVY|1|A|C|321
7UVY|1|A|G|322
7UVY|1|A|U|323
7UVY|1|A|A|324
7UVY|1|A|G|325
7UVY|1|A|A|326
7UVY|1|A|G|327
*
7UVY|1|A|C|339
7UVY|1|A|G|340
7UVY|1|A|U|341
7UVY|1|A|A|342
7UVY|1|A|C|343

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain T

50S ribosomal protein L24