J3_7UVZ_003

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGAAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVZ_003 not in the Motif Atlas

Homologous match to J3_4WF9_004

Geometric discrepancy: 0.1666

The information below is about J3_4WF9_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.7

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7UVZ|1|A|C|1293
7UVZ|1|A|G|1294
7UVZ|1|A|A|1295
7UVZ|1|A|A|1296
7UVZ|1|A|A|1297
7UVZ|1|A|G|1298
*
7UVZ|1|A|C|1623
7UVZ|1|A|A|1624
7UVZ|1|A|G|1625
*
7UVZ|1|A|C|1637
7UVZ|1|A|A|1638
7UVZ|1|A|A|1639
7UVZ|1|A|G|1640

Current chains

Chain A

23s ribosomal RNA

Nearby chains