J3_7UVZ_021

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GGAAC*GAACGUAGAG*CGUAC

Length

20 nucleotides

Bulged bases

7UVZ|1|A|U|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVZ_021 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0665

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7UVZ|1|A|G|299
7UVZ|1|A|G|300
7UVZ|1|A|A|301
7UVZ|1|A|A|302
7UVZ|1|A|C|303
*
7UVZ|1|A|G|318
7UVZ|1|A|A|319
7UVZ|1|A|A|320
7UVZ|1|A|C|321
7UVZ|1|A|G|322
7UVZ|1|A|U|323
7UVZ|1|A|A|324
7UVZ|1|A|G|325
7UVZ|1|A|A|326
7UVZ|1|A|G|327
*
7UVZ|1|A|C|339
7UVZ|1|A|G|340
7UVZ|1|A|U|341
7UVZ|1|A|A|342
7UVZ|1|A|C|343

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain T

50S ribosomal protein L24