J3_7UVZ_029
3D structure
- PDB id
- 7UVZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- GC*GGAAUAU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVZ_029 not in the Motif Atlas
- Geometric match to J3_5J7L_001
- Geometric discrepancy: 0.0835
- The information below is about J3_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.4
- Basepair signature
- cWW-cWW-cSW-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UVZ|1|a|G|48
7UVZ|1|a|C|49
*
7UVZ|1|a|G|357
7UVZ|1|a|G|358
7UVZ|1|a|A|359
7UVZ|1|a|A|360
7UVZ|1|a|U|361
7UVZ|1|a|A|362
7UVZ|1|a|U|363
*
7UVZ|1|a|A|389
7UVZ|1|a|G|390
7UVZ|1|a|C|391
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
Coloring options: