J3_7UW1_002

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UW1_002 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0592

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7UW1|1|A|C|696
7UW1|1|A|A|697
7UW1|1|A|G|698
*
7UW1|1|A|C|730
7UW1|1|A|G|731
7UW1|1|A|A|732
7UW1|1|A|A|733
7UW1|1|A|C|734
*
7UW1|1|A|G|758
7UW1|1|A|A|759
7UW1|1|A|U|760
7UW1|1|A|G|761

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2