J3_7UW1_003

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGAAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UW1_003 not in the Motif Atlas

Homologous match to J3_4WF9_004

Geometric discrepancy: 0.1663

The information below is about J3_4WF9_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.7

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7UW1|1|A|C|1293
7UW1|1|A|G|1294
7UW1|1|A|A|1295
7UW1|1|A|A|1296
7UW1|1|A|A|1297
7UW1|1|A|G|1298
*
7UW1|1|A|C|1623
7UW1|1|A|A|1624
7UW1|1|A|G|1625
*
7UW1|1|A|C|1637
7UW1|1|A|A|1638
7UW1|1|A|A|1639
7UW1|1|A|G|1640

Current chains

Chain A

23s ribosomal RNA

Nearby chains