Loop J3_7V2O

3D structure

PDB id: 7V2O (explore in PDB, NAKB, or RNA 3D Hub)
Description: T.thermophilus 30S ribosome with KsgA, class K4
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

Loop

Sequence: CUUGACAUGCUAGGGAAC*GGUGCCCCGCGAGGGGAGCCCUAGCACAG*CUUACG
Length: 53 nucleotides
Bulged bases: 7V2O|1|A|G|1003, 7V2O|1|A|C|1006, 7V2O|1|A|C|1009, 7V2O|1|A|G|1017, 7V2O|1|A|C|1196
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7V2O|1|A|C|968
7V2O|1|A|U|969
7V2O|1|A|U|970
7V2O|1|A|G|971
7V2O|1|A|A|972
7V2O|1|A|C|973
7V2O|1|A|A|974
7V2O|1|A|U|975
7V2O|1|A|G|976
7V2O|1|A|C|977
7V2O|1|A|U|978
7V2O|1|A|A|979
7V2O|1|A|G|980
7V2O|1|A|G|981
7V2O|1|A|G|982
7V2O|1|A|A|983
7V2O|1|A|A|984
7V2O|1|A|C|985
*
7V2O|1|A|G|1002
7V2O|1|A|G|1003
7V2O|1|A|U|1004
7V2O|1|A|G|1005
7V2O|1|A|C|1006
7V2O|1|A|C|1007
7V2O|1|A|C|1008
7V2O|1|A|C|1009
7V2O|1|A|G|1010
7V2O|1|A|C|1011
7V2O|1|A|G|1012
7V2O|1|A|A|1013
7V2O|1|A|G|1014
7V2O|1|A|G|1015
7V2O|1|A|G|1016
7V2O|1|A|G|1017
7V2O|1|A|A|1018
7V2O|1|A|G|1019
7V2O|1|A|C|1020
7V2O|1|A|C|1021
7V2O|1|A|C|1022
7V2O|1|A|U|1023
7V2O|1|A|A|1024
7V2O|1|A|G|1025
7V2O|1|A|C|1026
7V2O|1|A|A|1027
7V2O|1|A|C|1028
7V2O|1|A|A|1029
7V2O|1|A|G|1030
*
7V2O|1|A|C|1192
7V2O|1|A|U|1193
7V2O|1|A|U|1194
7V2O|1|A|A|1195
7V2O|1|A|C|1196
7V2O|1|A|G|1197

Current chains

Chain A: 16s ribosomal RNA

Nearby chains

Chain N: 30S ribosomal protein S14 type Z

J3_7V2O_014