J3_7W5B_001
3D structure
- PDB id
- 7W5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The cryo-EM structure of human C* complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CAU*ACGCAAAUUC*GGCCUUUUGG
- Length
- 23 nucleotides
- Bulged bases
- 7W5B|1|F|C|79, 7W5B|1|F|C|81, 7W5B|1|F|A|84, 7W5B|1|F|U|85, 7W5B|1|F|U|86, 7W5B|1|H|U|15, 7W5B|1|H|U|17, 7W5B|1|H|U|18
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7W5B|1|F|C|55
7W5B|1|F|A|56
7W5B|1|F|U|57
*
7W5B|1|F|A|78
7W5B|1|F|C|79
7W5B|1|F|G|80
7W5B|1|F|C|81
7W5B|1|F|A|82
7W5B|1|F|A|83
7W5B|1|F|A|84
7W5B|1|F|U|85
7W5B|1|F|U|86
7W5B|1|F|C|87
*
7W5B|1|H|G|11
7W5B|1|H|G|12
7W5B|1|H|C|13
7W5B|1|H|C|14
7W5B|1|H|U|15
7W5B|1|H|U|16
7W5B|1|H|U|17
7W5B|1|H|U|18
7W5B|1|H|G|19
7W5B|1|H|G|20
Current chains
- Chain F
- U6 snRNA
- Chain H
- U2 snRNA
Nearby chains
- Chain 4
- Pre-mRNA
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain B
- U5 spliceosomal RNA; U5 snRNA
- Chain G
- Pre-mRNA
- Chain J
- Crooked neck-like protein 1
- Chain L
- Cell division cycle 5-like protein
- Chain M
- Pre-mRNA-splicing factor SYF2
- Chain P
- Spliceosome-associated protein CWC15 homolog
- Chain R
- SNW domain-containing protein 1
- Chain T
- Pleiotropic regulator 1
Coloring options: