J3_7WTL_006

3D structure

PDB id

7WTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

7WTL|1|C2|A|219

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTL|1|C2|A|213
7WTL|1|C2|G|214
7WTL|1|C2|A|215
7WTL|1|C2|U|216
7WTL|1|C2|A|217
7WTL|1|C2|A|218
7WTL|1|C2|A|219
7WTL|1|C2|A|220
7WTL|1|C2|A|221
7WTL|1|C2|A|222
7WTL|1|C2|U|223
7WTL|1|C2|C|224
7WTL|1|C2|A|225
7WTL|1|C2|A|226
7WTL|1|C2|U|227
7WTL|1|C2|G|228
*
7WTL|1|C2|C|237
7WTL|1|C2|U|238
7WTL|1|C2|C|239
7WTL|1|C2|U|240
7WTL|1|C2|U|241
7WTL|1|C2|U|242
7WTL|1|C2|G|243
*
7WTL|1|C2|C|250
7WTL|1|C2|A|251
7WTL|1|C2|U|252

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4-A

Chain SG

40S ribosomal protein S6-A

Chain SI

40S ribosomal protein S8-A

Chain SL

40S ribosomal protein S11-A