3D structure

PDB id
7WTW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGGA*UUAAGAG*CAUUA
Length
16 nucleotides
Bulged bases
7WTW|1|2|G|921
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7WTW|1|2|U|682
7WTW|1|2|G|683
7WTW|1|2|G|684
7WTW|1|2|A|685
*
7WTW|1|2|U|917
7WTW|1|2|U|918
7WTW|1|2|A|919
7WTW|1|2|A|920
7WTW|1|2|G|921
7WTW|1|2|A|922
7WTW|1|2|G|923
*
7WTW|1|2|C|1019
7WTW|1|2|A|1020
7WTW|1|2|U|1021
7WTW|1|2|U|1022
7WTW|1|2|A|1023

Current chains

Chain 2
18S rRNA

Nearby chains

Chain H
40S ribosomal protein S7
Chain L
40S ribosomal protein S11
Chain N
40S ribosomal protein S13
Chain W
40S ribosomal protein S15a
Chain X
40S ribosomal protein S23
Chain b
40S ribosomal protein S27

Coloring options:

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