J3_7WTX_009

3D structure

PDB id

7WTX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGGC*GGACAAG*CCCGAGAUUG

Length

22 nucleotides

Bulged bases

7WTX|1|2|A|1454, 7WTX|1|2|U|1477

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTX|1|2|C|1391
7WTX|1|2|U|1392
7WTX|1|2|G|1393
7WTX|1|2|G|1394
7WTX|1|2|C|1395
*
7WTX|1|2|G|1450
7WTX|1|2|G|1451
7WTX|1|2|A|1452
7WTX|1|2|C|1453
7WTX|1|2|A|1454
7WTX|1|2|A|1455
7WTX|1|2|G|1456
*
7WTX|1|2|C|1470
7WTX|1|2|C|1471
7WTX|1|2|C|1472
7WTX|1|2|G|1473
7WTX|1|2|A|1474
7WTX|1|2|G|1475
7WTX|1|2|A|1476
7WTX|1|2|U|1477
7WTX|1|2|U|1478
7WTX|1|2|G|1479

Current chains

Chain 2

18S rRNA

Nearby chains

Chain K

RRP12-like protein

Chain R

40S ribosomal protein S17