J3_7WTZ_010

3D structure

PDB id

7WTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGGC*GGACAAG*CCCGAGAUUG

Length

22 nucleotides

Bulged bases

7WTZ|1|2|A|1454, 7WTZ|1|2|U|1477

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTZ|1|2|C|1391
7WTZ|1|2|U|1392
7WTZ|1|2|G|1393
7WTZ|1|2|G|1394
7WTZ|1|2|C|1395
*
7WTZ|1|2|G|1450
7WTZ|1|2|G|1451
7WTZ|1|2|A|1452
7WTZ|1|2|C|1453
7WTZ|1|2|A|1454
7WTZ|1|2|A|1455
7WTZ|1|2|G|1456
*
7WTZ|1|2|C|1470
7WTZ|1|2|C|1471
7WTZ|1|2|C|1472
7WTZ|1|2|G|1473
7WTZ|1|2|A|1474
7WTZ|1|2|G|1475
7WTZ|1|2|A|1476
7WTZ|1|2|U|1477
7WTZ|1|2|U|1478
7WTZ|1|2|G|1479

Current chains

Chain 2

18S rRNA

Nearby chains

Chain C

40S ribosomal protein S2

Chain K

RRP12-like protein

Chain R

40S ribosomal protein S17