J3_7XAM_012

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCCAUAG*CGC*GACA

Length

14 nucleotides

Bulged bases

7XAM|1|B|C|12, 7XAM|1|B|U|15, 7XAM|1|B|C|106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7XAM|1|B|U|11
7XAM|1|B|C|12
7XAM|1|B|C|13
7XAM|1|B|A|14
7XAM|1|B|U|15
7XAM|1|B|A|16
7XAM|1|B|G|17
*
7XAM|1|B|C|69
7XAM|1|B|G|70
7XAM|1|B|C|71
*
7XAM|1|B|G|104
7XAM|1|B|A|105
7XAM|1|B|C|106
7XAM|1|B|A|107

Current chains

Chain B

5S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain W

50S ribosomal protein L25

Chain X

50S ribosomal protein L27