J3_7Y41_011

3D structure

PDB id

7Y41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CCC*GAUUGAU*AACCG

Length

15 nucleotides

Bulged bases

7Y41|1|A|U|3054, 7Y41|1|A|C|3106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Y41|1|A|C|3035
7Y41|1|A|C|3036
7Y41|1|A|C|3037
*
7Y41|1|A|G|3051
7Y41|1|A|A|3052
7Y41|1|A|U|3053
7Y41|1|A|U|3054
7Y41|1|A|G|3055
7Y41|1|A|A|3056
7Y41|1|A|U|3057
*
7Y41|1|A|A|3103
7Y41|1|A|A|3104
7Y41|1|A|C|3105
7Y41|1|A|C|3106
7Y41|1|A|G|3107

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain O

50S ribosomal protein L17

Chain b

50S ribosomal protein L32