3D structure

PDB id
7Y7G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.34 Å

Loop

Sequence
CGG*CUUG*CG
Length
9 nucleotides
Bulged bases
7Y7G|1|A|U|653
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7Y7G_020 not in the Motif Atlas
Geometric match to J3_4LFB_011
Geometric discrepancy: 0.0709
The information below is about J3_4LFB_011
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_56052.5
Basepair signature
cWW-F-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

7Y7G|1|A|C|586
7Y7G|1|A|G|587
7Y7G|1|A|G|588
*
7Y7G|1|A|C|651
7Y7G|1|A|U|652
7Y7G|1|A|U|653
7Y7G|1|A|G|654
*
7Y7G|1|A|C|754
7Y7G|1|A|G|755

Current chains

Chain A
16S rRNA

Nearby chains

Chain H
30S ribosomal protein S8
Chain L
30S ribosomal protein S12
Chain O
30S ribosomal protein S15
Chain Q
30S ribosomal protein S17

Coloring options:


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