3D structure

PDB id
7Y7G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.34 Å

Loop

Sequence
UAU*AGACUGC*GAGGAAGGUG
Length
20 nucleotides
Bulged bases
7Y7G|1|A|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7Y7G_025 not in the Motif Atlas
Homologous match to J3_5J7L_054
Geometric discrepancy: 0.1035
The information below is about J3_5J7L_054
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_17791.2
Basepair signature
cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
Number of instances in this motif group
2

Unit IDs

7Y7G|1|A|U|1116
7Y7G|1|A|A|1117
7Y7G|1|A|U|1118
*
7Y7G|1|A|A|1155
7Y7G|1|A|G|1156
7Y7G|1|A|A|1157
7Y7G|1|A|C|1158
7Y7G|1|A|U|1159
7Y7G|1|A|G|1160
7Y7G|1|A|C|1161
*
7Y7G|1|A|G|1175
7Y7G|1|A|A|1176
7Y7G|1|A|G|1177
7Y7G|1|A|G|1178
7Y7G|1|A|A|1179
7Y7G|1|A|A|1180
7Y7G|1|A|G|1181
7Y7G|1|A|G|1182
7Y7G|1|A|U|1183
7Y7G|1|A|G|1184

Current chains

Chain A
16S rRNA

Nearby chains

Chain B
30S ribosomal protein S2
Chain G
30S ribosomal protein S7
Chain I
30S ribosomal protein S9
Chain J
30S ribosomal protein S10
Chain N
30S ribosomal protein S14

Coloring options:


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