J3_7Y7G_031

3D structure

PDB id

7Y7G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.34 Å

Loop

Sequence

UCGACC*GAAA*UA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7Y7G_031 not in the Motif Atlas

Homologous match to J3_5J7L_043

Geometric discrepancy: 0.0929

The information below is about J3_5J7L_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_92705.1

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

1

Unit IDs

7Y7G|1|a|U|1344
7Y7G|1|a|C|1345
7Y7G|1|a|G|1346
7Y7G|1|a|A|1347
7Y7G|1|a|C|1348
7Y7G|1|a|C|1349
*
7Y7G|1|a|G|1382
7Y7G|1|a|A|1383
7Y7G|1|a|A|1384
7Y7G|1|a|A|1385
*
7Y7G|1|a|U|1402
7Y7G|1|a|A|1403

Current chains

Chain a

23S rRNA

Nearby chains

Chain s

50S ribosomal protein L23