J3_7ZAH_001

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

C(4AC)G*CGA(A2M)ACC*GGGG

Length

14 nucleotides

Bulged bases

7ZAH|1|2|A|372

QA status

Modified nucleotides: 4AC, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|C|52
7ZAH|1|2|4AC|53
7ZAH|1|2|G|54
*
7ZAH|1|2|C|370
7ZAH|1|2|G|371
7ZAH|1|2|A|372
7ZAH|1|2|A2M|373
7ZAH|1|2|A|374
7ZAH|1|2|C|375
7ZAH|1|2|C|376
*
7ZAH|1|2|G|402
7ZAH|1|2|G|403
7ZAH|1|2|G|404
7ZAH|1|2|G|405

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 7

Translation initiation factor 5B

Chain D

30S ribosomal protein S4

Chain E

30S ribosomal protein S4e

Chain N

30S ribosomal protein S12