J3_7ZAH_003

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*CGCCAGUGG*CGC

Length

14 nucleotides

Bulged bases

7ZAH|1|2|U|690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|G|639
7ZAH|1|2|G|640
*
7ZAH|1|2|C|684
7ZAH|1|2|G|685
7ZAH|1|2|C|686
7ZAH|1|2|C|687
7ZAH|1|2|A|688
7ZAH|1|2|G|689
7ZAH|1|2|U|690
7ZAH|1|2|G|691
7ZAH|1|2|G|692
*
7ZAH|1|2|C|699
7ZAH|1|2|G|700
7ZAH|1|2|C|701

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 5

mRNA

Chain A

30S ribosomal protein S3Ae

Chain M

30S ribosomal protein S11

Chain Q

30S ribosomal protein S15