J3_7ZAH_015

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAAG*CUAGUACC*GCGAAUACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|C|908
7ZAH|1|2|A|909
7ZAH|1|2|A|910
7ZAH|1|2|G|911
*
7ZAH|1|2|C|1318
7ZAH|1|2|U|1319
7ZAH|1|2|A|1320
7ZAH|1|2|G|1321
7ZAH|1|2|U|1322
7ZAH|1|2|A|1323
7ZAH|1|2|C|1324
7ZAH|1|2|C|1325
*
7ZAH|1|2|G|1345
7ZAH|1|2|C|1346
7ZAH|1|2|G|1347
7ZAH|1|2|A|1348
7ZAH|1|2|A|1349
7ZAH|1|2|U|1350
7ZAH|1|2|A|1351
7ZAH|1|2|C|1352
7ZAH|1|2|G|1353

Current chains

Chain 2

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S7

Chain K

30S ribosomal protein S9

Chain X

30S ribosomal protein S28e