J3_7ZAH_017

3D structure

PDB id

7ZAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GCGAC*GAGAG*(4AC)GAAAC

Length

16 nucleotides

Bulged bases

7ZAH|1|2|A|1188

QA status

Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAH|1|2|G|962
7ZAH|1|2|C|963
7ZAH|1|2|G|964
7ZAH|1|2|A|965
7ZAH|1|2|C|966
*
7ZAH|1|2|G|1008
7ZAH|1|2|A|1009
7ZAH|1|2|G|1010
7ZAH|1|2|A|1011
7ZAH|1|2|G|1012
*
7ZAH|1|2|4AC|1184
7ZAH|1|2|G|1185
7ZAH|1|2|A|1186
7ZAH|1|2|A|1187
7ZAH|1|2|A|1188
7ZAH|1|2|C|1189

Current chains

Chain 2

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S14 type Z