3D structure

PDB id
7ZAH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
(4AC)GUCAG*CGAGAC*GCGACG
Length
18 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: 4AC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZAH|1|2|4AC|1028
7ZAH|1|2|G|1029
7ZAH|1|2|U|1030
7ZAH|1|2|C|1031
7ZAH|1|2|A|1032
7ZAH|1|2|G|1033
*
7ZAH|1|2|C|1072
7ZAH|1|2|G|1073
7ZAH|1|2|A|1074
7ZAH|1|2|G|1075
7ZAH|1|2|A|1076
7ZAH|1|2|C|1077
*
7ZAH|1|2|G|1162
7ZAH|1|2|C|1163
7ZAH|1|2|G|1164
7ZAH|1|2|A|1165
7ZAH|1|2|C|1166
7ZAH|1|2|G|1167

Current chains

Chain 2
16S rRNA

Nearby chains

Chain F
30S ribosomal protein S5
Chain K
30S ribosomal protein S9
Chain L
30S ribosomal protein S10
Chain P
30S ribosomal protein S14 type Z
Chain S
30S ribosomal protein S17e
Chain Z
30S ribosomal protein S3

Coloring options:

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