J3_7ZAI_003

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GG*CGCCAGUGG*CGC

Length

14 nucleotides

Bulged bases

7ZAI|1|2|U|690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|G|639
7ZAI|1|2|G|640
*
7ZAI|1|2|C|684
7ZAI|1|2|G|685
7ZAI|1|2|C|686
7ZAI|1|2|C|687
7ZAI|1|2|A|688
7ZAI|1|2|G|689
7ZAI|1|2|U|690
7ZAI|1|2|G|691
7ZAI|1|2|G|692
*
7ZAI|1|2|C|699
7ZAI|1|2|G|700
7ZAI|1|2|C|701

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 5

mRNA

Chain A

30S ribosomal protein S3Ae

Chain M

30S ribosomal protein S11

Chain Q

30S ribosomal protein S15