J3_7ZAI_019

3D structure

PDB id

7ZAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGC*GGACUGC*GAGGAAGGGG

Length

20 nucleotides

Bulged bases

7ZAI|1|2|G|1157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZAI|1|2|C|1081
7ZAI|1|2|G|1082
7ZAI|1|2|C|1083
*
7ZAI|1|2|G|1129
7ZAI|1|2|G|1130
7ZAI|1|2|A|1131
7ZAI|1|2|C|1132
7ZAI|1|2|U|1133
7ZAI|1|2|G|1134
7ZAI|1|2|C|1135
*
7ZAI|1|2|G|1149
7ZAI|1|2|A|1150
7ZAI|1|2|G|1151
7ZAI|1|2|G|1152
7ZAI|1|2|A|1153
7ZAI|1|2|A|1154
7ZAI|1|2|G|1155
7ZAI|1|2|G|1156
7ZAI|1|2|G|1157
7ZAI|1|2|G|1158

Current chains

Chain 2

16S rRNA

Nearby chains

Chain H

30S ribosomal protein S7

Chain K

30S ribosomal protein S9

Chain L

30S ribosomal protein S10

Chain P

30S ribosomal protein S14 type Z

Chain S

30S ribosomal protein S17e