J3_7ZJX_015

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CA(PSU)UCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

7ZJX|1|L5|U|4728

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|C|4709
7ZJX|1|L5|A|4710
7ZJX|1|L5|PSU|4711
7ZJX|1|L5|U|4712
7ZJX|1|L5|C|4713
7ZJX|1|L5|G|4714
*
7ZJX|1|L5|C|4722
7ZJX|1|L5|C|4723
7ZJX|1|L5|U|4724
7ZJX|1|L5|G|4725
7ZJX|1|L5|C|4726
7ZJX|1|L5|U|4727
7ZJX|1|L5|U|4728
7ZJX|1|L5|C|4729
7ZJX|1|L5|U|4730
*
7ZJX|1|L5|A|4799
7ZJX|1|L5|A|4800
7ZJX|1|L5|G|4801
7ZJX|1|L5|G|4802

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein uL3

Chain LS

60S ribosomal protein uL22

Chain Lg

60S ribosomal protein L31