J3_7ZJX_033

3D structure

PDB id

7ZJX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome programmed with SECIS and SBP2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJX|1|L5|C|451
7ZJX|1|L5|A|452
7ZJX|1|L5|G|453
7ZJX|1|L5|U|454
7ZJX|1|L5|C|455
*
7ZJX|1|L5|G|695
7ZJX|1|L5|U|696
7ZJX|1|L5|G|697
7ZJX|1|L5|C|698
7ZJX|1|L5|G|699
*
7ZJX|1|L5|C|1236
7ZJX|1|L5|G|1237
7ZJX|1|L5|A|1238
7ZJX|1|L5|U|1239
7ZJX|1|L5|G|1240

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LH

60S ribosomal protein L6

Chain Lh

Ribosomal protein L32

Chain Li

60S ribosomal protein L35a

Chain Ls

60S ribosomal protein eL28