J3_7ZJX_045
3D structure
- PDB id
- 7ZJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome programmed with SECIS and SBP2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- (OMC)UGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7ZJX|1|S2|U|1478
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJX|1|S2|OMC|1392
7ZJX|1|S2|U|1393
7ZJX|1|S2|G|1394
7ZJX|1|S2|G|1395
7ZJX|1|S2|C|1396
*
7ZJX|1|S2|G|1451
7ZJX|1|S2|G|1452
7ZJX|1|S2|A|1453
7ZJX|1|S2|C|1454
7ZJX|1|S2|A|1455
7ZJX|1|S2|A|1456
7ZJX|1|S2|G|1457
*
7ZJX|1|S2|C|1471
7ZJX|1|S2|C|1472
7ZJX|1|S2|C|1473
7ZJX|1|S2|G|1474
7ZJX|1|S2|A|1475
7ZJX|1|S2|G|1476
7ZJX|1|S2|A|1477
7ZJX|1|S2|U|1478
7ZJX|1|S2|U|1479
7ZJX|1|S2|G|1480
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S28
- Chain SG
- Guanine nucleotide-binding protein subunit beta-2-like 1
- Chain SH
- 40S ribosomal protein S29
- Chain SO
- 40S ribosomal protein S3
- Chain SQ
- Ribosomal protein S5
- Chain Sb
- 40S ribosomal protein uS9
- Chain Sc
- 40S ribosomal protein S17
- Chain Sf
- 40S ribosomal protein S20
Coloring options: