J3_7ZRS_004
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- AUCA*UAACUACUG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 7ZRS|1|2|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_004 not in the Motif Atlas
- Homologous match to J3_4V88_033
- Geometric discrepancy: 0.0925
- The information below is about J3_4V88_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38616.1
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
7ZRS|1|2|A|881
7ZRS|1|2|U|882
7ZRS|1|2|C|883
7ZRS|1|2|A|884
*
7ZRS|1|2|U|928
7ZRS|1|2|A|929
7ZRS|1|2|A|930
7ZRS|1|2|C|931
7ZRS|1|2|U|932
7ZRS|1|2|A|933
7ZRS|1|2|C|934
7ZRS|1|2|U|935
7ZRS|1|2|G|936
*
7ZRS|1|2|C|943
7ZRS|1|2|A|944
7ZRS|1|2|U|945
7ZRS|1|2|U|946
7ZRS|1|2|U|947
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AB
- 40S ribosomal protein S1-A
- Chain AN
- 40S ribosomal protein S13
- Chain AO
- 40S ribosomal protein S14-B
- Chain Aa
- RPS26B isoform 1
- Chain BA
- 60S ribosomal protein L2-A
- Chain Bo
- 60S ribosomal protein L43-A
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