J3_7ZRS_030
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CAU*AGAUG*CUG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_030 not in the Motif Atlas
- Homologous match to J3_5TBW_015
- Geometric discrepancy: 0.1425
- The information below is about J3_5TBW_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_48314.1
- Basepair signature
- cWW-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7ZRS|1|5|C|3299
7ZRS|1|5|A|3300
7ZRS|1|5|U|3301
*
7ZRS|1|5|A|3315
7ZRS|1|5|G|3316
7ZRS|1|5|A|3317
7ZRS|1|5|U|3318
7ZRS|1|5|G|3319
*
7ZRS|1|5|C|3389
7ZRS|1|5|U|3390
7ZRS|1|5|G|3391
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BB
- 60S ribosomal protein L3
- Chain BO
- 60S ribosomal protein L17-A
- Chain Bc
- 60S ribosomal protein L31-A
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