J3_7ZRS_032

3D structure

PDB id

7ZRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

7ZRS|1|2|U|227, 7ZRS|1|2|U|238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZRS|1|2|A|213
7ZRS|1|2|G|214
7ZRS|1|2|A|215
7ZRS|1|2|U|216
7ZRS|1|2|A|217
7ZRS|1|2|A|218
7ZRS|1|2|A|219
7ZRS|1|2|A|220
7ZRS|1|2|A|221
7ZRS|1|2|A|222
7ZRS|1|2|U|223
7ZRS|1|2|C|224
7ZRS|1|2|A|225
7ZRS|1|2|A|226
7ZRS|1|2|U|227
7ZRS|1|2|G|228
*
7ZRS|1|2|C|237
7ZRS|1|2|U|238
7ZRS|1|2|C|239
7ZRS|1|2|U|240
7ZRS|1|2|U|241
7ZRS|1|2|U|242
7ZRS|1|2|G|243
*
7ZRS|1|2|C|250
7ZRS|1|2|A|251
7ZRS|1|2|U|252

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4-A

Chain AG

40S ribosomal protein S6-A

Chain AL

40S ribosomal protein S11-A