3D structure

PDB id
7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAGACAUG*UGGG*CAUAAUG
Length
19 nucleotides
Bulged bases
7ZS5|1|1|U|441
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZS5|1|1|C|435
7ZS5|1|1|A|436
7ZS5|1|1|G|437
7ZS5|1|1|A|438
7ZS5|1|1|C|439
7ZS5|1|1|A|440
7ZS5|1|1|U|441
7ZS5|1|1|G|442
*
7ZS5|1|1|U|492
7ZS5|1|1|G|493
7ZS5|1|1|G|494
7ZS5|1|1|G|495
*
7ZS5|1|1|C|618
7ZS5|1|1|A|619
7ZS5|1|1|U|620
7ZS5|1|1|A|621
7ZS5|1|1|A|622
7ZS5|1|1|U|623
7ZS5|1|1|G|624

Current chains

Chain 1
25S ribosomal RNA

Nearby chains

Chain BG
60S ribosomal protein L6-A
Chain BQ
60S ribosomal protein L17-A
Chain Bf
60S ribosomal protein L32
Chain Bg
60S ribosomal protein L33-A

Coloring options:

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