J3_7ZS5_017
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AC*GAUACGU*AAUCU
- Length
- 14 nucleotides
- Bulged bases
- 7ZS5|1|4|C|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZS5_017 not in the Motif Atlas
- Homologous match to J3_8P9A_067
- Geometric discrepancy: 0.1116
- The information below is about J3_8P9A_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7ZS5|1|4|A|44
7ZS5|1|4|C|45
*
7ZS5|1|4|G|58
7ZS5|1|4|A|59
7ZS5|1|4|U|60
7ZS5|1|4|A|61
7ZS5|1|4|C|62
7ZS5|1|4|G|63
7ZS5|1|4|U|64
*
7ZS5|1|4|A|96
7ZS5|1|4|A|97
7ZS5|1|4|U|98
7ZS5|1|4|C|99
7ZS5|1|4|U|100
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain BY
- 60S ribosomal protein L25
- Chain Bi
- 60S ribosomal protein L35-A
- Chain Bk
- 60S ribosomal protein L37-A
- Chain Bm
- 60S ribosomal protein L39
Coloring options: