J3_7ZS5_027
3D structure
- PDB id
- 7ZS5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGCUG*CACGUUCUAGCAUUCAAG*UGAU
- Length
- 27 nucleotides
- Bulged bases
- 7ZS5|1|1|G|2549, 7ZS5|1|1|U|2550, 7ZS5|1|1|U|2551, 7ZS5|1|1|C|2552, 7ZS5|1|1|U|2553, 7ZS5|1|1|A|2554, 7ZS5|1|1|U|2558, 7ZS5|1|1|U|2559, 7ZS5|1|1|C|2560
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZS5|1|1|A|2529
7ZS5|1|1|G|2530
7ZS5|1|1|C|2531
7ZS5|1|1|U|2532
7ZS5|1|1|G|2533
*
7ZS5|1|1|C|2546
7ZS5|1|1|A|2547
7ZS5|1|1|C|2548
7ZS5|1|1|G|2549
7ZS5|1|1|U|2550
7ZS5|1|1|U|2551
7ZS5|1|1|C|2552
7ZS5|1|1|U|2553
7ZS5|1|1|A|2554
7ZS5|1|1|G|2555
7ZS5|1|1|C|2556
7ZS5|1|1|A|2557
7ZS5|1|1|U|2558
7ZS5|1|1|U|2559
7ZS5|1|1|C|2560
7ZS5|1|1|A|2561
7ZS5|1|1|A|2562
7ZS5|1|1|G|2563
*
7ZS5|1|1|U|2578
7ZS5|1|1|G|2579
7ZS5|1|1|A|2580
7ZS5|1|1|U|2581
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain BB
- 60S ribosomal protein L43-A
- Chain BC
- 60S ribosomal protein L2-A
- Chain BI
- 60S ribosomal protein L8-A
- Chain BY
- 60S ribosomal protein L25
- Chain Ba
- 60S ribosomal protein L27-A
- Chain Bd
- 60S ribosomal protein L30
- Chain Bh
- 60S ribosomal protein L34-A
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