J3_7ZUX_045
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UAGAUG*CAUAGCAGG*CGAAUUGCAAUGUCA
- Length
- 30 nucleotides
- Bulged bases
- 7ZUX|1|5|A|3173, 7ZUX|1|5|G|3174, 7ZUX|1|5|A|3216, 7ZUX|1|5|G|3217, 7ZUX|1|5|G|3220, 7ZUX|1|5|A|3269, 7ZUX|1|5|U|3271, 7ZUX|1|5|C|3273
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZUX_045 not in the Motif Atlas
- Homologous match to J3_8P9A_064
- Geometric discrepancy: 0.1848
- The information below is about J3_8P9A_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03190.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-F-F-F-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
7ZUX|1|5|U|3172
7ZUX|1|5|A|3173
7ZUX|1|5|G|3174
7ZUX|1|5|A|3175
7ZUX|1|5|U|3176
7ZUX|1|5|G|3177
*
7ZUX|1|5|C|3213
7ZUX|1|5|A|3214
7ZUX|1|5|U|3215
7ZUX|1|5|A|3216
7ZUX|1|5|G|3217
7ZUX|1|5|C|3218
7ZUX|1|5|A|3219
7ZUX|1|5|G|3220
7ZUX|1|5|G|3221
*
7ZUX|1|5|C|3266
7ZUX|1|5|G|3267
7ZUX|1|5|A|3268
7ZUX|1|5|A|3269
7ZUX|1|5|U|3270
7ZUX|1|5|U|3271
7ZUX|1|5|G|3272
7ZUX|1|5|C|3273
7ZUX|1|5|A|3274
7ZUX|1|5|A|3275
7ZUX|1|5|U|3276
7ZUX|1|5|G|3277
7ZUX|1|5|U|3278
7ZUX|1|5|C|3279
7ZUX|1|5|A|3280
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain EE
- 60S ribosomal protein L6-B
- Chain EL
- 60S ribosomal protein L14-A
- Chain EN
- 60S ribosomal protein L16-A
- Chain EO
- 60S ribosomal protein L17-A
- Chain Ee
- 60S ribosomal protein L33-A
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