J3_7ZW0_032

3D structure

PDB id

7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

FAP-80S Complex - Rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AGAUAAAAAAUCAAUG*CUCUUUG*CAU

Length

26 nucleotides

Bulged bases

7ZW0|1|2|U|227, 7ZW0|1|2|U|238

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZW0|1|2|A|213
7ZW0|1|2|G|214
7ZW0|1|2|A|215
7ZW0|1|2|U|216
7ZW0|1|2|A|217
7ZW0|1|2|A|218
7ZW0|1|2|A|219
7ZW0|1|2|A|220
7ZW0|1|2|A|221
7ZW0|1|2|A|222
7ZW0|1|2|U|223
7ZW0|1|2|C|224
7ZW0|1|2|A|225
7ZW0|1|2|A|226
7ZW0|1|2|U|227
7ZW0|1|2|G|228
*
7ZW0|1|2|C|237
7ZW0|1|2|U|238
7ZW0|1|2|C|239
7ZW0|1|2|U|240
7ZW0|1|2|U|241
7ZW0|1|2|U|242
7ZW0|1|2|G|243
*
7ZW0|1|2|C|250
7ZW0|1|2|A|251
7ZW0|1|2|U|252

Current chains

Chain 2

18S ribosomal RNA (RDN18-1)

Nearby chains

Chain sS

40S ribosomal protein S4-B

Chain sT

40S ribosomal protein S6-B

Chain sX

40S ribosomal protein S11-A