3D structure

PDB id
7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
FAP-80S Complex - Rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
AGAUGG*CGUUUCAAAG*CACCAU
Length
22 nucleotides
Bulged bases
7ZW0|1|LA|C|1556, 7ZW0|1|LA|A|1558
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZW0|1|LA|A|1537
7ZW0|1|LA|G|1538
7ZW0|1|LA|A|1539
7ZW0|1|LA|U|1540
7ZW0|1|LA|G|1541
7ZW0|1|LA|G|1542
*
7ZW0|1|LA|C|1551
7ZW0|1|LA|G|1552
7ZW0|1|LA|U|1553
7ZW0|1|LA|U|1554
7ZW0|1|LA|U|1555
7ZW0|1|LA|C|1556
7ZW0|1|LA|A|1557
7ZW0|1|LA|A|1558
7ZW0|1|LA|A|1559
7ZW0|1|LA|G|1560
*
7ZW0|1|LA|C|1579
7ZW0|1|LA|A|1580
7ZW0|1|LA|C|1581
7ZW0|1|LA|C|1582
7ZW0|1|LA|A|1583
7ZW0|1|LA|U|1584

Current chains

Chain LA
25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LD
5.8S ribosomal RNA; 5.8S rRNA
Chain LE
60S ribosomal protein L2-A
Chain LK
60S ribosomal protein L8-A
Chain LQ
60S ribosomal protein L15-A
Chain La
60S ribosomal protein L25
Chain Lm
60S ribosomal protein L37-A

Coloring options:

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